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5.6 Notes on Matching

This section provides a bit more detail on the how the row matching of local tables (sections Section 5.2 and Section 5.3) is done. It is designed to give a rough idea to interested parties; it is not a tutorial description from first principles of how it all works.

The basic algorithm for matching is based on dividing up the space of possibly-matching rows into an (indeterminate) number of bins. These bins will typically correspond to disjoint cells of a physical or notional coordinate space, but need not do so. In the first step, each row of each table is assessed to determine which bins might contain matches to it - this will generally be the bin that it falls into and any "adjacent" bins within a distance corresponding to the matching tolerance. A reference to the row is associated with each such bin. In the second step, each bin is examined, and if two or more rows are associated with it every possible pair of rows in the associated set is assessed to see whether it does in fact constitute a matched pair. This will identify all and only those row pairs which are related according to the selected match criteria. During this process a number of optimisations may be applied depending on the details of the data and the requested match.

The matching algorithm described above is roughly an O(N log(N)) process, where N is the total number of rows in all the tables participating in a match. This is good news, since the naive interpretation would be O(N2). This can break down however if the matching tolerance is such that the number of rows associated with some or most bins gets large, in which case an O(M2) component can come to dominate, where M is the number of rows per bin. The average number of rows per bin is reported in the logging while a match is proceeding, so you can keep an eye on this.

For more detail on the matching algorithms, see the javadocs for the uk.ac.starlink.table.join package, or contact the author.


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TOPCAT - Tool for OPerations on Catalogues And Tables
Starlink User Note253
TOPCAT web page: http://www.starlink.ac.uk/topcat/
Author email: m.b.taylor@bristol.ac.uk
Mailing list: topcat-user@jiscmail.ac.uk